Bioinformatics Group

Bioinformatics Group

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The Bioinformatics Group of the International Scientific and Educational Center of NAS RA (National Academy of Sciences of the Republic of Armenia) was founded in 2000 by the Full-Member of NAS RA, Prof. Aram Artashes Shahinyan and is considered as one of the leading research centers of Armenia in Computer Physics, Chemistry and Biology. The team consists of seven researchers, including one Docto

A protonated L-cysteine adsorption on gold surface: A Molecular Dynamics Study 03/09/2021

Our new joint paper published in "Colloids and Surfaces A: Physicochemical and Engineering Aspects" Journal. We would also like to thank the Institute for Informatics and Automation Problems of NAS RA (Ինֆորմատիկայի և ավտոմատացման պրոբլեմների ինստիտուտ / IIAP) staff for providing us with the computational resources.

A protonated L-cysteine adsorption on gold surface: A Molecular Dynamics Study The adsorption of protonated L-cysteine onto Au(111) surface was studied via molecular dynamics method. The detailed examination of trajectories revea…

Quantum Approximated Graph Cutting: A Rapid Replacement for T-REMD? 15/12/2020

Our new preprint at biorxiv.org
https://www.biorxiv.org/content/10.1101/2020.12.11.420968v1

Quantum Approximated Graph Cutting: A Rapid Replacement for T-REMD? Determining an optimal protein configuration for the employment of protein binding analysis as completed by Temperature based Replica Exchange Molecular Dynamics (T-REMD) is an important process in the accurate depiction of a protein’s behavior in different solvent environments, especially when de...

Spiked gold nanotriangles: formation, characterization and applications in surface-enhanced Raman spectroscopy and plasmon-enhanced catalysis - RSC Advances (RSC Publishing) 26/02/2020

Our new article at RSC Advances (Royal Society of Chemistry) Journal.

Spiked gold nanotriangles: formation, characterization and applications in surface-enhanced Raman spectroscopy and plasmon-enhanced catalysis - RSC Advances (RSC Publishing) We show the formation of metallic spikes on the surface of gold nanotriangles (AuNTs) by using the same reduction process which has been used for the synthesis of gold nanostars. We confirm that silver nitrate operates as a shape-directing agent in combination with ascorbic acid as the reducing agen...

Molecular dynamics study of ACBP denaturation in alkyl sulfates demonstrates possible pathways of unfolding through fused surfactant clusters 09/12/2019

Our new paper at PEDS (Oxford Academic (Oxford University Press) Journal. We would like to thank the Institute for Informatics and Automation Problems of NAS RA ( Ինֆորմատիկայի և ավտոմատացման պրոբլեմների ինստիտուտ / IIAP team for providing us with the computing resources to perform this large-scale computational project.

Molecular dynamics study of ACBP denaturation in alkyl sulfates demonstrates possible pathways of unfolding through fused surfactant clusters Abstract. Anionic surfactants denature proteins at low millimolar concentrations, yet little is known about the underlying molecular mechanisms. Here, we under

03/10/2019

We have some updates in "Publications" section.
http://bioinformatics.am/publications/

Կատարվել են որոշ թարմացումներ "Հրատարակումներ" բաժնում: http://bioinformatics.am/publications/

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